Halobacterium identification in saltworks of Gran Canaria (Canary Islands, Spain)
DOI:
https://doi.org/10.30564/jfsr.v2i1.1464Abstract
This work analyzes bacterial communities present in evaporation ponds of solar salterns of Gran Canaria and reveals specific organisms through molecular techniques. Solar salterns are protected areas in Canary Islands where salt is produced from sea water by solar and wind powered evaporation. Salt was an important product for ancient islanders who used it for a broad field of purposes, but also has a great importance in recent time for its implications in the island economy.
Based on amplifications with specific primers for 16S ribosomal DNA (16S rDNA) and subsequent nested-PCR approaches, different amplicons were obtained, and analyzed in silico. A taxonomic classification was carried out through phylogenetic trees.
Results revealed different bacteria according to the evaporation grade of crystallizer ponds in saline works. It is worthstanding the presence of the genus Halobacterium in all crystallizer ponds. This opens an interesting framework for further studies and continuative molecular characterization approaches of bacterial communities in solar salterns of Gran Canaria.
Keywords:
bacteria; 16S rDNA; halobacteria; Halobacterium; Solar Saltern PondReferences
[1] Rodriguez-Valera F Ventosa A Juez G Imhoff JF. Variation of environmental features and microbial populations with salt concentrations in a multi-pond saltern[J]. Microbial Ecology, 1985, 11:107-115.
[2] Rocha RDM Costa DF Lucena-Filho MA Bezerra RM Medeiros DH Azevedo-Silva AM Araújo CN Xavier-Filho L. Brazilian solar saltworks-ancient uses and future possibilities[J]. Aquatic biosystems, 2012, 8:8.
[3] Gómez-Villegas P Viagra J Léon R. Characterization of the Microbial Population Inhabiting a Solar Saltern Pond of the Odiel Marshlands (SW Spain)[J]. Marine Drugs, 2018, 16: 332.
[4] Benlloch S López‐López A Casamayor EO Øvreås L Goddard V Daae FL Smerdon G Massana R Joint I Thingstad F. Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern[J]. Environmental Microbiology, 2002, 4:349-360.
[5] Antón J Llobet‐Brossa E Rodríguez‐Valera F Amann R. Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds[J]. Environmental Microbiology, 1999, 1:517-523.
[6] Oren A Rodríguez‐Valera F. The contribution of halophilic Bacteria to the red coloration of saltern crystallizer ponds[J]. FEMS Microbiology Ecology, 2001, 36:123-130.
[7] Oren A Dubinsky Z. On the red coloration of saltern crystallizer ponds. II. Additional evidence for the contribution of halobacterial pigments[J]. International Journal of Salt Lake Research, 1994, 3:9-13.
[8] Bardavid RE Khristo P Oren A. Interrelationships between Dunaliella and halophilic prokaryotes in saltern crystallizer ponds[J]. Extremophiles, 2008, 12: 5-14.
[9] Litchfield CD. Potential for industrial products from the halophilic Archaea[J]. Journal Industrial Microbiology and Biotechnology, 2011, 38(10): 1 635-1 647.
[10] Fang CJ Ku KL Lee MH Su NW. Influence of nutritive factors on C50 carotenoids production by Haloferax mediterranei ATCC 33500 with two-stage cultivation[J]. Bioresource Technology, 2010, 101(16): 6 487-6 493.
[11] Asker D Ohta Y. Haloferax alexandrinus sp. nov., an extremely halophilic canthaxanthin-producing archaeon from a solar saltern in Alexandria (Egypt)[J]. Journal Systematic and Evolutionary Microbiology, 2002, 52(3): 729-738.
[12] Luque A Martín JL Dorta P Mayer P. Temperature trends on Gran Canaria (Canary Islands). An example of global warming over the subtropical Northeastern Atlantic[J]. Atmospheric and Climate Sciences, 2014, 4:20-28.
[13] Garcia-Jimenez P Carrasco-Acosta M Enrique-Payá C Alemán-López I Betancort-Rodriguez JR. Herrera-Melián JA. Composition and molecular identification of bacterial community in seawater desalination plants [J]. Advances in Microbiology, 2019, 9: 863-876.
[14] Deng Y Xu G Sui L. Isolation and characterization of halophilic bacteria and archaea from salt ponds in Hangu Saltworks, Tianjin, China[J]. Chinese Journal of Oceanology and Limnology, 2015, 33(4): 862-868.
[15] Barghouthi SA. A universal method for the identification of bacteria based on general PCR primers. Indian Journal of Microbiology, 2011, 51: 430-444.
[16] Thompson JD Higgins DG Gibson TJ. CLUSTAL W: Improving the Sensitivity of Progressive Multiple Sequence Alignment through Sequence Weighting, Position-Specific Gap Penalties and Weight Matrix Choice[J]. Nucleic Acids Research, 1994, 22: 4673-4680.
[17] Nei M Kumar S. Molecular Evolution and Phylogenetics[B]. Oxford University Press, New York, 2000.
[18] Kumar S Stecher G Li M Knyaz C Tamura K. MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms[J]. Molecular Biology and Evolution, 2018, 35: 1547-1549.
[19] Felsenstein J. Confidence Limits on Phylogenies: An Approach Using the Bootstrap[J]. Evolution, 1985, 39: 783-791.
[20] Janda JM Abbott SL. 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls[J]. Journal of Clinical Microbiology, 2007, 45: 2761-2764.
[21] Fredriksson NJ Hermansson M Wilén BM. The choice of PCR primers has great impact on assessments of bacterial community diversity and dynamics in a wastewater treatment plant[J]. PLoS One, 2013, 8: e76431.
[22] Rohban R Amoozegar MA Ventosa A. Screening and isolation of halophilic bacteria producing extracellular hydrolyses from Howz Soltan Lake, Iran[J]. Journal of Industrial Microbiology & Biotechnology, 2009, 36: 333-340.
[23] Martínez-Cánovas MJ Quesada E Llamas I Béjar V. Halomonas ventosae sp. nov., a moderately halophilic, denitrifying, exopolysaccharide-producing bacterium[J]. International Journal of Systematic and Evolutionary Microbiology, 2004, 54: 733-737.
[24] Bayley S Kushner D. The ribosomes of the extremely halophilic bacterium, Halobacterium cutirubrum[J]. Journal of Molecular Biology, 1964, 9: 654IN3-669IN4.
[25] Williams WD. Salinity as a determinant of the structure of biological communities in salt lakes[J]. Hydrobiologia, 1998, 381: 191-201.
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