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Soybean Improvement for Lipoxygenase-free by Simple Sequence Repeat (SSR) Markers Selection
DOI:
https://doi.org/10.30564/jrb.v3i1.2818Abstract
Beany flavor of soybean (Glycine max (L.) Merr.) is caused by oxidation of polyunsaturated fatty acids by the action of three lipoxygenases (LOX1, LOX2 and LOX3) present in mature seeds. The unpleasant flavor restricts human consumption of soybean products. This problem could be solved through genetic elimination of alleles that code these enzymes. Parental cultivars and two hybrid population were selected and analyzed using genetic markers for alleles locus, encoding Lox1, Lox2 and Lox3 free. The SSR marker Satt 212 confirmed the presence of the homozygous null-allele Lx3 in the cultivar BRS 213, which were used for hybridization with BR 36. Heterozygote F1 hybrid plants and homozygous Lx3 lines in F2 segregating populations were successfully identified. The SSR markers Sat090 and Sat417 were the most effective diagnostic markers among all SSR markers tested. Satt090 and Satt417 confirmed the presence of the homozygous Lx2 null-allele in the parental cultivar BRS 213 by flanking Lx2 loci at 3,00 and 2,77 cM, respectively. The presence of Lx2 null allele in the F2 segregating populations between BRS 213 and BRS 155 was successfully identified with a selection efficiency of 98% and have great potential for further application in the Brazilian breeding program aimed at improving soybean seed quality.
Keywords:
Glycine max; Lipoxygenase isozymes; Molecular markers; MASReferences
[1] CONAB – Companhia Nacional De Abastecimento (2020), “Acompanhamento da safra brasileira de grãos – Safra 2020/2021”, CONAB, Brasília, 8(2),1- 62.
[2] Hildebrand, D.F. (1989), “Lipoxygenases”, Physiol. Plant. 76(2),249-253. https://doi.org/10.1111/j.1399-3054.1989.tb05641.x
[3] Hajika, M., Kitamura, K., Igita, K., Nakazawa, and Y. (1992), “Genetic Relationships among the Genes for Lipoxygenase-1, -2 and -3 Isozymes in Soybean[Glycine max (L.) MERRILL] Seed”, Jpn. J. Breed., 42(4), 787-792.
[4] Wang, C., Croft, K.P.C., Jarlfors, U., and Hildebrand, D.F. (1999), “Subcellular localization studies indicate that lipoxygenases 1 to 6 are not involved in lipid mobilization during soybean germination”, Plant Physiol. 120(1),227-236.
[5] Hildebrand, D.F., and Hymowitz, T. (1981), “Two soybean genotypes lacking lipoxygenase-1”, J. Am. Oil Chem. Soc. 58(5),583-586.
[6] Hildebrand, D.F., and Hymowitz, T. (1982), Inheritance of Lipoxygenase-I activity in soybean seeds, Crop Sci. 22(4),851-853.
[7] Kitamura, K., Davies, C.S., Kaizuma, N., and Nielsen, N.C. (1983), “Genetic analysis of a null-allele for lipoxygenase-3 in soybean seeds”, Crop Sci. 23(5),924-927.
[8] Kitamura, K. (1984), “Biochemical of lipoxygenase lacking mutants, L1-Less, L2-Less and L3-Less soybeans”, Agricul. Biol. Chem.,48(9),2339-2346.
[9] Kitamura, K., Kumagai, T., and Kikuchi, A. (1985), “Inheritance of lipoxygenase- 2 and genetic relationships among genes for lipoxygenase-1, -2 and -3 isozymes in soybean seeds”, Jpn. J. Breed. 35(4),413- 42.
[10] Davies, C.S., and Nielsen, N.C. (1986), “Genetic analysis of a null‐allele for Lipoxygenase‐2 in Soybean1 ”, Crop. Sci. 26(3),460-463.
[11] Davies, C.S., Nielsen, S.S., and Nielsen, N.C. (1987), “Flavor improvement of soybean preparation by genetic removal of lipoxygenase-2”, J. Am. Oil Chem. Soc. 64(10),1428-1433.
[12] Wang, W.H., Takano, T., Shibata, D., Kitamura, K., and Takeda, G. (1994), “Molecular basis of a null mutation in soybean lipoxygenase 2: substitution of glutamine for an iron-ligand histidine”, Proc. Natl. Acad. Sci. USA 91(13),5828-5832.
[13] Reinprecht, Y., Poysa, V.W., Yu, K., Rajcan, I., Ablett, G.R., and Peter Pauls, K. (2006), “Seed and agronomic QTL in low linolenic acid, lipoxygenase-free soybean (Glycine max (L.) Merrill) germplasm”, Genome 49(12),1510-1527.
[14] Lenis, J.M., Gillman, J.D., Lee, J.D., Shannon, J.G., and Bilyeu, K.D. (2010), “Soybean seed lipoxygenase genes: molecular characterization and development of molecular marker assays”, Theor. App. Genet. 120,1139-1149.
[15] Reinprecht, Y., Luk-Labey, S.Y., Yu, K., Poysa, V.W., Rajcan, I, Ablett, G.R., and Peter Pauls, K. (2011), “Molecular basis of seed lipoxygenase null traits in soybean line OX948”, Theor. Appl. Genet., 122,1247-1264.
[16] Hajika, M., Igita, K., and Kitamura, K. (1991), “A line lacking all the seed lipoxygenase isozymes induced by gamma-ray irradiation”, Jpn. J. Breed. 41(3),507-509.
[17] Lee, K.J., Hwang, J.E., Velusamy, V., Ha, B.K., Kim, J.B., Kim, S.H., Ahn, J.W., Kang, S.Y., and Kim, D.S. (2014), “Selection and molecular characterization of a lipoxygenase-free soybean mutant line induced by gamma irradiation”, Theor. Appl. Genet. 127(11),2405-13.
[18] Kitamura, K. (1991), “Spontaneous and induced mutations of seed proteins in soybean (Glycine max L. Merrill)”, Gamma Field Symposia 30,61-69.
[19] Wang, J., Kuang, H., Zhang, Z., Yan, L., Zhang, M., and Guan, Y. (2020), “Generation of seed lipoxygenase-free soybean using CRISPR-Cas9”, Crop J. 8(3),432-439.
[20] Kim, M.Y., Ha, B.K., Jun, T.H., Hwang, E.Y., Van, K., Kuk, Y.I., and Lee, S.K. (2004), “Single nucleotide polymorphism discovery and linkage mapping of lipoxygenase-2 gene Lx2 in soybean”, Euphytica 135,169-177.
[21] Shin, J.H., Van, K., Do Kim, K., Lee, Y., Jun, T., and Lee, S. (2012), “Molecular sequence variations of the lipoxygenase-2 gene in soybean”, Theor. Appl. Genet. 124,613-22.
[22] Carpentieri-Pipolo, V. (2015), “UEL 175: a novel lipoxygenase-free soybean cultivar with kunitz trypsin inhibitor absence”, Crop. Breed. Appl. Biotechnol. 15(3),191-192.
[23] Pípolo, A.E., Almeida, L.A., Kiihl, R.A.S., Carrão- -Panizzi, M.C., Gomide, F.B., Miranda, L.C., Arias, C.A.A., Toledo, J.F.F., Kaster, M., Carneiro, G.E.S., Yorinori, J.T., Domit, L.A., Dias, W.P., and Almeida, A.M.R. (2005), “BRS 257 - nova cultivar para alimentação humana”,Reunião de Pesquisa de Soja da Região Central do Brasil. Cornélio Procópio. Resumos. Londrina: Embrapa Sojap. 371. (Embrapa Soja. Documentos, 257).
[24] Carrão Panizzi, M.C., Pípolo, A.E., Mandarino, J.M.G., Arantes, N.E., Garcia, A., De Toledo Benassi, V., Arias, C.A., Kaster, M., De Oliveira, M.F., Oliveira, M.A., De Toledo, J.F., Moreira, J.U.V. and Carneiro, G.E. De S. (2009), “Breeding specialty soybean cultivars for processing and value-added utilization at Embrapa in Brazil”, World Soybean Research Conference, Beijing. Developing A Global Soy Blue Print For A Safe Secure And Sustainable Supply: Proceedings, Chinese Academy Of Agricultural Sciences: Institute Of Crop Science. Beijing, China.
[25] Cruz, C.D. (1997), “Programa Genes - Aplicativo
[26] Computacional em Genética e Estatística”, Viçosa, MG: Editora UFV, v1. 442 p.
[27] Suda, I., Hajika, M., Nishiba, Y., Furuta, E., and Igita, K. (1995), “Simple and rapid method for the selective detection of individual lipoxygenase isozymes in soybean seeds”, J. Agric. Food Chem. 43(3),742- 747.
[28] Lander, E.S., Green, P., Abrahamson, J., Barlow, A., Daly, M.J., Lincoln, S.E., and Newberg, L. (1987), “Mapmaker: an interactive computer package for constructing genetic linkage maps of experimental and natural populations”, Genomics 1,174-181.
[29] Cregan, P.B., Jarvik, T., Bush, A.L., Shoemaker, R.C., Lark, K.G., Kahler, A.L., Kaya, N., Van Toai, T.T., Lohnes, D.G., Chung, J., and Specht, J.E. (1999), “An integrated genetic linkage map of the soybean genome”, Crop. Sci. 39(5),1464-1490.
[30] Cruz, C.D. (2011), “Programa GQMOL: programa para análise de genética quantitativa e molecular”, Viçosa: UFV, http://arquivo.ufv.br/dbg/gqmol/gqmol. htm
[31] Klein et al., 1988 (reference CTAB method DNA extraction from plants)
[32] Song, Q.J., Marek, L.F., Shoemaker, R.C., Lark, K.G., Concibido, V.C., Delannay, X., Specht, J.E., and Cregan, P.B. (2004), “A new integrated genetic linkage map of the soybean”, Theor. Appl. Genet. 109,122-8. DOI: https://doi.org/10.1007/s00122-004-1602-3.
[33] Grant, D., Nelson, R.T., Cannon, S.B., and Shoemaker, R.C. (2010), “SoyBase, the USDA-ARS soybean genetics and genomics database”, Nucleic Acids Res. 38(1), D843-D846. https://doi.org/10.1093/nar/gkp798.
[34] Kim, S.D., Kim, Y.H., Park, K.Y., Kim, H.T., Lee, Y.H., Lee, S.H., Seung, Y.K., Kim, H.S., Hong, E.H., and Kim, Y.S. (1997), “A new beany tasteless soybean variety “Jinpumkong 2” with good quality”, RDA J. Crop Sci. 39(2),112-115.
[35] Kim, Y.S., Moon, J.K., Cho, J.H., Kim, H.T., Park, K.Y., and Kim, S.J. (2006), “Improvement of special characters on three elite soybean cultivars by markers-assisted selection”, Treat. Crop Sci. 7,197-210.
[36] Sanguineti, C., Dias-Neto, E., and Simpson, A.J.G. (1994), “RAPD silver staining and recovery of PCR products separated on polyacrylamide gels”, Biotechniques 17(5),914-921.
[37] Akkaya, M.S., Shoemaker, R.C., Specht, J.E., Bhagway, A.A. and Cregan, P.B. (1995), “Integration of simple sequence repeat DNA markers into a soybean linkage map”, Crop. Sci. 35(5), 1439-1445.
[38] Mandal, S., Nandita, S., Rajarani, A.P., and Santha, I.M. (2013), “Molecular cloning, characterization and expression of lipoxygenase 2 (lox-2) isozyme from India soybean [(Glycine max(L.) Merrill] cv. Pusa 16”, Indian J. Biochem. Biophys. 50(1),54-63.
[39] Hajika, M., Igita, K., and Kitamura, K. (1995), “Induction of a Soybean (Glycine max (L.) Merrill) line lacking all seed lipoxygenase isozymes” JARQ 29:73-76.
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